Pre-VTP Preparation: Metagenomics + Microbial Surveillance

This guide is intended to provide a foundation in the computational environments you will use in the Metagenomics + Microbial Surveillance VTP.

1. Access your Linux terminal via your AWS-hosted RStudio instance

Access your Linux terminal by logging into RStudio via the web browser (can be found in the this Google Sheet: https://docs.google.com/spreadsheets/d/17YP4jSDXc1G4yKQd-zj2kZVmf1Tr6lSn5GithA84zKk/edit#gid=21277647)

Setup to your Linux environment:https://youtu.be/vVwmF4HTT3A

It should look like this once you’re finished setting up your Linux environment: https://milrd.org/wp-content/uploads/2022/06/LinuxTerminalOverview.png